Edge distance graph kernel and its application to small molecule classification

Tan, Mehmet

Edge distance graph kernel and its application to small molecule classification

Mehmet TAN (TOBB Ekonomi ve Teknoloji Üniversitesi, Mühendislik Fakültesi, Elektrik Elektronik Mühendisliği Bölümü, Ankara, Türkiye)

Turkish Journal of Electrical Engineering and Computer Sciences

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Yıl: 2017 Cilt: 25 Sayı: 3 Sayfa Aralığı: 2479 - 2490 Metin Dili: İngilizce İndeks Tarihi: 29-07-2022

Edge distance graph kernel and its application to small molecule classification

Öz:

Graph classification is an important problem in graph mining with various applications in different fields. Kernel methods have been successfully applied to this problem, recently producing promising results. A graph kernel that mostly specifies classification performance has to be defined in order to apply kernel methods to a graph classification problem. Although there are various previously proposed graph kernels, the problem is still worth investigating, as the available kernels are far from perfect. In this paper, we propose a new graph kernel based on a recently proposed concept called edge distance-k graphs. These new graphs are derived from the original graph and have the potential to be used as novel graph descriptors. We propose a method to convert these graphs into a multiset of strings that is further used to compute a kernel for graphs. The proposed graph kernel is then evaluated on various data sets in comparison to a recently proposed group of graph kernels. The results are promising, both in terms of performance and computational requirements

Anahtar Kelime:

Konular: Mühendislik, Elektrik ve Elektronik

Belge Türü: Makale Makale Türü: Araştırma Makalesi Erişim Türü: Erişime Açık

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APA	Tan M (2017). Edge distance graph kernel and its application to small molecule classification. , 2479 - 2490.
Chicago	Tan Mehmet Edge distance graph kernel and its application to small molecule classification. (2017): 2479 - 2490.
MLA	Tan Mehmet Edge distance graph kernel and its application to small molecule classification. , 2017, ss.2479 - 2490.
AMA	Tan M Edge distance graph kernel and its application to small molecule classification. . 2017; 2479 - 2490.
Vancouver	Tan M Edge distance graph kernel and its application to small molecule classification. . 2017; 2479 - 2490.
IEEE	Tan M "Edge distance graph kernel and its application to small molecule classification." , ss.2479 - 2490, 2017.
ISNAD	Tan, Mehmet. "Edge distance graph kernel and its application to small molecule classification". (2017), 2479-2490.

APA	Tan M (2017). Edge distance graph kernel and its application to small molecule classification. Turkish Journal of Electrical Engineering and Computer Sciences, 25(3), 2479 - 2490.
Chicago	Tan Mehmet Edge distance graph kernel and its application to small molecule classification. Turkish Journal of Electrical Engineering and Computer Sciences 25, no.3 (2017): 2479 - 2490.
MLA	Tan Mehmet Edge distance graph kernel and its application to small molecule classification. Turkish Journal of Electrical Engineering and Computer Sciences, vol.25, no.3, 2017, ss.2479 - 2490.
AMA	Tan M Edge distance graph kernel and its application to small molecule classification. Turkish Journal of Electrical Engineering and Computer Sciences. 2017; 25(3): 2479 - 2490.
Vancouver	Tan M Edge distance graph kernel and its application to small molecule classification. Turkish Journal of Electrical Engineering and Computer Sciences. 2017; 25(3): 2479 - 2490.
IEEE	Tan M "Edge distance graph kernel and its application to small molecule classification." Turkish Journal of Electrical Engineering and Computer Sciences, 25, ss.2479 - 2490, 2017.
ISNAD	Tan, Mehmet. "Edge distance graph kernel and its application to small molecule classification". Turkish Journal of Electrical Engineering and Computer Sciences 25/3 (2017), 2479-2490.