Yıl: 2018 Cilt: 46 Sayı: 3 Sayfa Aralığı: 445 - 455 Metin Dili: İngilizce DOI: 10.15671/HJBC.2018.252 İndeks Tarihi: 12-11-2018

Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil

Öz:
In this study, bacterial strains, capable of using TNT as a nitrogen source, were isolated from TNT-contaminated soil samples collected from military region in Kırıkkale, Turkey. We selected three strains that showed the highest TNT degradation capacity and according to 16S rRNA sequence analysis, the strains were identified as Klebsiella pneumoniae (designated SC1 K1, showed 99% homology), Raoultella planticola (designated SC1 K4, showed 99% homology) and Pseudomonas putida (designated SC1 K5, showed 99% homology). These strain were cultured in medium containing 100 mg L-1 TNT, SC1 K1 degraded 90 % of the initial TNT, SC1 K4 degraded 95 % of the initial TNT, and SC1 K5 degraded 84 % of the initial TNT after 24 h of incubation. Then, to remove TNT more efficiently, we constructed a bacterial consortium with these strains. The developed consortium was cultured in medium containing 100 mg L-1 TNT and the consortium removed 97.2 % of the initial TNT after four-hour incubation period. According to HPLC analyses, The consortium transformed TNT to 2-amino-4,6- dinitrotoluene, 4-amino-2,6-dinitrotoluene and an unknown metabolite. The isolates showed high TNT degradation capacity compared to many previous studies and the developed bacterial consortium can be used to remediate the TNT-contaminated environments.
Anahtar Kelime:

Konular: Biyoloji Mühendislik, Kimya

2,4,6-Trinitrotoluen (TNT) ile Kirlenmiş Topraktan İzole Edilen TNT’yi Parçayalan Bakterilerden Oluşan Bir Bakteri Konsorsiyumu ile TNT’nin Etkili Parçalanması

Öz:
Bu çalışmada, Kırıkkale’de askeri bölgeden alınan TNT ile kontamine toprak örneklerinden, TNT’yi azot kaynağı olarak kullanabilen bakteri suşları izole edilmiştir. En yüksek TNT parçalama kapasitesi gösteren üç suş seçilmiş ve 16S rRNA dizi analizine göre suşlar Klebsiella pneumoniae (SC1 K1 olarak gösterildi,% 99 homoloji gösterdi), Raoultella planticola (SC1 K4 olarak gösterildi,% 99 homoloji gösterdi) ve Pseudomonas putida (SC1 K5 olarak gösterildi,% 99 homolog gösterdi) olarak tanımlanmıştır. Bu suşlar 100 mg L-1 TNT içeren besiyerinde kültür edilmiş ve 24 saatlik inkübasyon süresinin sonunda SC1 suşu başlangıçtaki TNT’nin % 90’ını, SC1 K4 suşu başlangıçtaki TNT’nin % 95’ini ve SC1 K5 suşu başlangıçtaki TNT’nin % 84’ünü parçalamıştır. Ardından, TNT’yi daha etkili parçalamak için bu suşlarla bir bakteri konsorsiyumu oluşturulmuştur. Geliştirilen konsorsiyum 100 mg L-1 TNT içeren besiyerinde kültür edilmiş ve 4 saatlik inkübasyon süresinden sonra konsorsiyum başlangıç- taki TNT’nin % 97,2’sini yok etmiştir. HPLC analizlerine göre, konsorsiyum TNT’yi 2-amino-4,6-dinitrotoluen, 4-amino-2,6-dinitrotoluen ve bilinmeyen bir metabolite dönüştürmüştür. İzolatlar önceki birçok araştırmaya kıyasla yüksek TNT parçalama kapasitesi göstermiş ve oluşturulan bakteriyel konsorsiyum TNT ile kontamine olmuş ortamların remediasyonunda kullanılabilir.
Anahtar Kelime:

Konular: Biyoloji Mühendislik, Kimya
Belge Türü: Makale Makale Türü: Araştırma Makalesi Erişim Türü: Erişime Açık
  • Y. Kumagai, T. Wakayama, S. Li, A. Shinohara, A. Iwamatsu, G. Sun, N. Shimojo, Crystallin catalyzes the reductive activation of 2,4,6- trinitrotoluene to generate reactive oxygen species: A proposed mechanism for the induction of cataracts, FEBS Lett., 478 (2000) 295-298.
  • P. Sarkar, A.R. Rai, S. Ghosh, Degradation of aromatic petroleum hydrocarbons (BTEX) by a solvent tolerant bacterial consortium, J. Urban Environ. Eng., 7 (2013) 274-279.
  • B. Stenuit, S.N. Agathos, Rapid and unbiased colorimetric quantification of nitrite and ammonium ions released from 2,4,6-trinitrotoluene during biodegradation studies: Eliminating interferences, Int. Biodeterior. Biodegrad., 63 (2009) 116-122.
  • S.E. Barrows, C.J. Cramer, D.G. Truhlar, M.S. Elovits, E.J. Weber, Factors controlling regioselectivity in the reduction of polynitraromatics in aqueous solution, Environ, Sci. Technol., 30 (1996) 3028-3038.
  • T. Maeda, K. Kadokami, H.I. Ogawa, Isolated from TNTPolluted Soils in the Yamada Green Zone, Kitakyushu, Japan., J. Environ. Biotechnol., 6 (2006) 33-39.
  • H. Claus, T. Bausinger, I. Lehmler, N. Perret, G. Fels, U. Dehner, J. Preuss, H. König, Transformation of 2,4,6-trinitrotoluene (TNT) by Raoultella terrigena, Biodeg., 18 (2007) 27-35.
  • J.H. Shin, H.G. Song, Nitroreductase II involved in 2,4,6-trinitrotoluene degradation: Purification and characterization from Klebsiella sp. cl, J. Microbiol., 47 (2009) 536-541.
  • H. Kim, G.N. Bennett, H. Song, Degradation of 2,4,6-trinitrotoluene by Klebsiella sp . isolated from activated sludge, Biotechnol. Lett., 24 (2002) 2023- 2028.
  • O. Muter, K. Potapova, B. Limane, K. Sproge, I. Jakobsone, G. Cepurnieks, V. Bartkevics, The role of nutrients in the biodegradation of 2,4,6-trinitrotoluene in liquid and soil, J. Environ. Manage., 98 (2012) 51-55.
  • M.E. Fuller, J.F. Manning, Aerobic Gram-positive and Gram-negative bacteria exhibit differential sensitivity to and transformation of 2,4,6-trinitrotoluene (TNT), Curr. Microbiol., 35 (1997) 77-83.
  • G. Litake, S. Joshi, V. Ghole, TNT biotransformation potential of the clinical isolate of Salmonella typhimurium-potential ecological implications, Indian. J. Occup. Environ. Med., 9 (2005) 29-34.
  • H.A. Mercimek, S. Dincer, G. Guzeldag, A. Ozsavli, F. Matyar, Aerobic Biodegradation of 2,4,6-Trinitrotoluene (TNT) by Bacillus cereus isolated from Contaminated Soil, Microb. Ecol., 66 (2013) 512- 521.
  • A.G. Rahal, A.M. Lobna, Degradation of 2,4,6-Trinitrotoluene (TNT) by Soil Bacteria Isolated From TNT Contaminated Soil, Aust. J. Basic. Appl. Sci., 5 (2011) 8-17.
  • B.K. Shanmugam, S. Mahadevan, Metabolism and biotransformation of azo dye by bacterial consortium studied in a bioreaction calorimeter, Bioresour. Technol., 196 (2015) 500-508.
  • S. Hannah Elizabeth, A. Panneer Selvam, Pseudomonas aeruginosa SP TUHP1 isolated from TNT-polluted soils in thevellore district. Int. J. Pharm. Pharm. Sci., 6 (2014) 267-271.
  • D. Claus D, A standardized Gram staining procedure, World J. Microbiol. Biotechnol., 8 (1992) 451-452.
  • A. Üzer, E. Erçaǧ, R. Apak, Selective colorimetric determination of TNT partitioned between an alkaline solution and a strongly basic Dowex 1-X8 anion exchanger, Forensic Sci. Int., 174 (2008) 239-243.
  • M.I. Khan, J. Lee, J. Park, A toxicological review on potential microbial degradation intermediates of 2,4,6-trinitrotoluene, and its implications in bioremediation, KSCE J. Civ. Eng., 17 (2013) 1223-1231.
  • O. Drzyzga, D. Bruns-Nagel, T. Gorontzy, K.H. Blotevogel, D. Gemsa, E. von Löw, Mass balance studies with 14C-labeled 2,4,6-trinitrotoluene (TNT) mediated by an Anaerobic Desulfovibrio species and an Aerobic Serratia species, Curr. Microbiol., 37 (1998) 380-386.
  • J.A. Field, E. de Jong, G. Feijoo-Costa , J.A.M. de Bont, Screening for ligninolytic fungi applicable to the biodegradation of xenobiotics, Trends Biotechnol., 11 (1993) 44-49.
  • J.C. Spain, J.B. Hughes, H.J. Knackmuss, Biodegradation of Nitroaromatic Compounds and Explosives, Lewis Publishing, Florida, 2000.
  • L. Zou, D. Lu, Z. Liu, Pathways for Degrading TNT by Thu-Z: A Pantoea sp. Strain, Appl. Biochem. Biotechnol., 168 (2012) 1976-1988.
  • A. Esteve-nuñez, G. Lucchesi, B. Philipp, B. Schink, J.L. Ramos, Respiration of 2,4,6-Trinitrotoluene by Pseudomonas sp . Strain JLR11, J. Bacteriol., 182 (2000) 1352-1355.
  • M.M. Ederer, T.A. Lewis, R.L. Crawford, 2,4,6-Trinitrotoluene (TNT) transformation by clostridia isolated from a munition-fed bioreactor: comparison with non-adapted bacteria, J. Ind. Microbiol. Biotechnol., 18 (1997) 82-88.
  • E.L. Rylott, N.C. Bruce, Plants disarm soil: engineering plants for the phytoremediation of explosives, Trends. Biotechnol., 27 (2009) 73-81.
  • K.L. Sublette, E.V. Ganapathy, S. Schwartz, Degradation of munition wastes by Phanerochaete chrysosporium. Appl. Biochem. Biotechnol., 34-55 (1992) 709-723.
  • M. Kulkarni, A. Chaudhari, Microbial remediation of nitro-aromatic compounds: An overview, J. Environ. Manage., 85 (2007) 496-512.
  • M., Erkelens, E.M. Adetutu, M. Taha, L. TudararoAherobo, J. Antiabong, A. Provatas, A.S. Ball, Sustainable remediation-The application of bioremediated soil for use in the degradation of TNT chips, J. Environ. Manage., 110 (2012) 69-76.
  • W.J. Wujcik, W.L. Lowe, P.J. Marks, W.E. Sisk, Granular activated carbon pilot treatment studies for explosives removal from contaminated groundwater, Environ. Prog., 11 (1992) 178-189.
  • J.W. Kang, Removing environmental organic pollutants with bioremediation and phytoremediation, Biotechnol. Lett., 36 (2014) 1129-1139.
  • P. Bayman, G.V. Radkar, Transformation and tolerance of TNT (2,4,6-trinitrotoluene) by fungi. Int. Biodeterior. Biodegrad., 39 (1997) 45-53.
  • T.C. Schmidt, K. Steinbach, E. von Löw, G. Stork, Highly polar metabolites of nitroaromatic compounds in ammunition wastewater, Chemosph., 37 (1998) 1079-1090.
  • R. Boopathy, J. Manning, C.F. Kulpa, Biotransformation of explosives by anaerobic consortia in liquid culture and in soil slurry, Int. Biodeterior. Biodegradation., 41 (1998) 67-74.
  • N.C. Bruce, Microbial Degradation of Energetic Compounds, J. Chem. Technol. Biotechnol., 11 (1996) 362-364.
  • H. Claus, Microbial Degradation of 2,4,6- Trinitrotoluene In Vitro and in Natural Environments, In: S. Singh (eds.) Biol. Remediat. Explos. Residues, Springer International Publishing, Switzerland, (2014) 15-38.
  • J.D. Rodgers, N.J. Bunce, Treatment methods for the remediation of nitroaromatic explosives, Water Res., 35 (2001) 2101-2111.
  • K. Panz, K. Miksch, Phytoremediation of explosives (TNT, RDX, HMX) by wild-type and transgenic plants, J. Environ. Manage., 113 (2012) 85-92.
  • B. Gumuscu, T. Tekinay, Effective biodegradation of 2,4,6-trinitrotoluene using a novel bacterial strain isolated from TNT-contaminated soil, Int. Biodeterior. Biodegrad., 85 (2013) 35-41.
  • R.E. Kirk, P.F. Othmer, Encyclopedia of Chemical Technology, John Wiley & Sons, New York, 1993.
  • G.R. Chaudhry, Biological Degradation and Bioremediation of Toxic Chemicals, Dioscorides Press, Portland, 1994.
  • S.B. Funk, D.L. Crawford, R.L. Crawford, Bioremediation of nitroaromatic compounds, In: D.L. Crawford, R.L. Crawford (eds.) Bioremediation Princ. Appl. Cambridge University Press, Cambridge, 1996, 195-205.
  • S.Y. Oh, H.S. Yoon, T.Y. Jeong, S.D. Kim, Evaluation of remediation processes for explosive-contaminated soils: Kinetics and Microtox® bioassay, J. Chem. Technol. Biotechnol., 91 (2016) 928-937.
  • K.B. Lee, M.B. Gu, S.H. Moon, In situ generation of hydrogen peroxide and its use for enzymatic degradation of 2,4,6-trinitrotoluene, J. Chem. Technol. Biotechnol., 76 (2001) 811-819.
  • C. Park, T.H. Kim, S. Kim, S.W. Kim, J. Lee, S.H.S. Kim, Optimization for biodegradation of 2,4,6-trinitrotoluene (TNT) by Pseudomonas putida, J. Biosci. Bioeng., 95 (2003) 567-571.
  • L. Haselhorst, Bioremediation of 2,4,6-Trinitrotoluene (TNT) at munitions sites, Restor. Reclam. Rev., 4 (1999) 1-9.
  • E.M. Gallagher, Anaerobic Degradation of 2,4,6- Trinitrotoluene (TNT): Molecular Analysis of Active Degraders and Metabolic, PhD Thesis, The State University of New Jersey, New Jersey (2010) 1-127.
  • D. Kalderis, S.B. Hawthorne, A.A. Clifford, E. Gidarakos, Interaction of soil, water and TNT during degradation of TNT on contaminated soil using subcritical water, J. Hazard. Mater., 159 (2008) 329-334.
  • H.A. Mercimek, S. Dincer, G. Guzeldag, A. Ozsavli, F. Matyar, A. Arkut, F. Kayis, S.M. Ozdenefe, Degradation of 2,4,6-trinitrotoluene by P. aeruginosa and characterization of some metabolites, Brazilia. J. Microbiol., 46 (2015) 103-111.
  • 9. B.K. Robertson, P.K. Jjemba, Enhanced bioavailability of sorbed 2,4,6-trinitrotoluene (TNT) by a bacterial consortium. Chemosph., 58 (2005) 263-270.
  • A. Esteve-Núñez, A. Caballero, J.L. Ramos, Biological degradation of 2,4,6-trinitrotoluene, Microbiol. Mol. Biol. Rev., 65 (2001) 335-352.
  • D.H. Buckley, V. Huangyutitham, S.F. Hsu, T.A. Nelson, Stable isotope probing with 15N achieved by disentangling the effects of genome G+C content and isotope enrichment on DNA density, Appl. Environ. Microbiol., 73 (2007) 3189-3195.
  • R. Chakraborty, S.M.O. Connor, E. Chan, J.D. Coates, Anaerobic Degradation of Benzene, Toluene, Ethylbenzene and Xylene Compounds by Dechloromonas Strain RCB, Appl. Environ. Microbiol., 71 (2005) 8649-8655.
  • R. Boopathy, Bioremediation of explosives contaminated soil, Int. Biodeterior. Biodegrad., 46 (2000) 29-36.
  • K. Ayoub, E.D. van Hullebusch, M. Cassir, A. Bermond, Application of advanced oxidation processes for TNT removal: A review, J. Hazard. Mater., 178 (2010) 10-28.
APA GÜN GÖK Z, inal m, YİĞİTOĞLU M (2018). Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. , 445 - 455. 10.15671/HJBC.2018.252
Chicago GÜN GÖK ZEHRA,inal murat,YİĞİTOĞLU Mustafa Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. (2018): 445 - 455. 10.15671/HJBC.2018.252
MLA GÜN GÖK ZEHRA,inal murat,YİĞİTOĞLU Mustafa Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. , 2018, ss.445 - 455. 10.15671/HJBC.2018.252
AMA GÜN GÖK Z,inal m,YİĞİTOĞLU M Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. . 2018; 445 - 455. 10.15671/HJBC.2018.252
Vancouver GÜN GÖK Z,inal m,YİĞİTOĞLU M Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. . 2018; 445 - 455. 10.15671/HJBC.2018.252
IEEE GÜN GÖK Z,inal m,YİĞİTOĞLU M "Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil." , ss.445 - 455, 2018. 10.15671/HJBC.2018.252
ISNAD GÜN GÖK, ZEHRA vd. "Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil". (2018), 445-455. https://doi.org/10.15671/HJBC.2018.252
APA GÜN GÖK Z, inal m, YİĞİTOĞLU M (2018). Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. Hacettepe Journal of Biology and Chemistry, 46(3), 445 - 455. 10.15671/HJBC.2018.252
Chicago GÜN GÖK ZEHRA,inal murat,YİĞİTOĞLU Mustafa Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. Hacettepe Journal of Biology and Chemistry 46, no.3 (2018): 445 - 455. 10.15671/HJBC.2018.252
MLA GÜN GÖK ZEHRA,inal murat,YİĞİTOĞLU Mustafa Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. Hacettepe Journal of Biology and Chemistry, vol.46, no.3, 2018, ss.445 - 455. 10.15671/HJBC.2018.252
AMA GÜN GÖK Z,inal m,YİĞİTOĞLU M Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. Hacettepe Journal of Biology and Chemistry. 2018; 46(3): 445 - 455. 10.15671/HJBC.2018.252
Vancouver GÜN GÖK Z,inal m,YİĞİTOĞLU M Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil. Hacettepe Journal of Biology and Chemistry. 2018; 46(3): 445 - 455. 10.15671/HJBC.2018.252
IEEE GÜN GÖK Z,inal m,YİĞİTOĞLU M "Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil." Hacettepe Journal of Biology and Chemistry, 46, ss.445 - 455, 2018. 10.15671/HJBC.2018.252
ISNAD GÜN GÖK, ZEHRA vd. "Effective Degradation of 2,4,6-Trinitrotoluene (TNT) with a Bacterial Consortium Developed from High TNT-degrading Bacteria Isolated from TNT-contaminated Soil". Hacettepe Journal of Biology and Chemistry 46/3 (2018), 445-455. https://doi.org/10.15671/HJBC.2018.252